The menu itself saves the directories that you have already used. How do I remove directories from the list? I am asking because I have several folders with the same name and they appear the same in the list. I have to hover over the directory to see where they point to.

Much thanks!

Look here:

Settings-User Inteface-Behavior -- 'Transfer loading priority/location prompt'

or here:

Settings-Transfers-Locations -- 'Location shortcuts in transfer context menu'